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Seegene Technologies allplex sars-cov-2 variants i, ii assay
Allplex Sars Cov 2 Variants I, Ii Assay, supplied by Seegene Technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/allplex+sars-cov_2+variants+ii/allplex+sars+cov+2+assay/pmc10716720-118-18-26
Average 90 stars, based on 1 article reviews
allplex sars-cov-2 variants i, ii assay - by Bioz Stars, 2026-09
90/100 stars

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Multiplex Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Real-time Polymerase Chain Reaction:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Genotyping Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Diagnostic Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Sampling:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Western Blot:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Sample Prep:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Lateral Flow Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Enzyme-linked Immunosorbent Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Recombinant:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Clinical Proteomics:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Nucleic Acid Purification:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Variant Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Reverse Transcription Polymerase Chain Reaction:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Ii Assay:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Sequencing:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

RNA Extraction:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Amplification:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Mutagenesis:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.

Polymerase Chain Reaction:

Article Title: Rapid screening of SARS-CoV-2 variants, a key tool for pandemic surveillance
Article Snippet: 33–52 , Allplex SARS-CoV-2 Variants II Assay (Seegene, Seoul, South Korea) , K417N, K417T, L452R, W152C , Microlab STARlet (Seegene, Seoul, South Korea).

Article Title: Detection of Neutralizing Antibodies in COVID-19 Patients from Steve Biko Academic Hospital Complex: A Pilot Study
Article Snippet: The same samples were then reflextested on the AllPlex SARS-CoV-2 Variants II panel (Seegene, Seoul, Republic of Korea) to identify four notable SARS-CoV-2 S gene mutations (L452R, W152C, K417T and K417N) and distinguish between the B.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Studies that evaluated diagnostic tests for the detection of SARS-CoV-2 genes and antigens included RT-PCR variant genotyping [ ], followed by the Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay by Seegene (Seoul, South Korea).

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Article Title: Two-Period Study Results from a Large Italian Hospital Laboratory Attesting SARS-CoV-2 Variant PCR Assay Evolution
Article Snippet: In this context, based on the S mutation assortment among SARS-CoV-2 variants, Seegene Inc. (Seoul, South Korea) has recently developed two multiplex PCR assays, namely, the Allplex SARS-CoV-2 Variants I assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_i_assay ) and Allplex SARS-CoV-2 Variants II assay ( https://www.seegene.com/assays/allplex_sars-cov-2_variants_ii_assay ).

Article Title: Intrinsic generation time of the SARS-CoV-2 Omicron variant: An observational study of household transmission
Article Snippet: Viral RNA was extracted from nasopharyngeal swab and specimens were screened by a commercial multiplex Real-Time PCR assay (SARS-CoV-2 Variants I and II Allplex kit, Seegene; Seoul, South Korea) detecting L452R, W152C, K417T, K417N, E484Q, E484K, and N501Y mutations and HV69/70 deletion, and able to identify SARS-CoV-2 variants Alpha, Beta, Gamma, Delta, Epsilon, Omicron BA.1 and Omicron BA.2.

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review
Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay , Seegene/South Korea , Specific primers and probes for Beta and Delta variants , Nasopharyngeal swab , Not applicable , ~2 h , Slightly complex.

Article Title: Detection of SARS-CoV-2 Variants via Different Diagnostics Assays Based on Single-Nucleotide Polymorphism Analysis.
Article Snippet: We also thank Seegene Technologies for providing the Novaplex SARS-CoV VII and Allplex SARS-CoV-2 Variants II assay kits used in this study.



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Overview of articles on diagnostic testing for SARS-CoV-2 in South Africa.

Journal: Tropical Medicine and Infectious Disease

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review

doi: 10.3390/tropicalmed8120514

Figure Lengend Snippet: Overview of articles on diagnostic testing for SARS-CoV-2 in South Africa.

Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Techniques: Diagnostic Assay, Sampling, Western Blot

Performance characteristics of the diagnostic tests for SARS-CoV-2.

Journal: Tropical Medicine and Infectious Disease

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review

doi: 10.3390/tropicalmed8120514

Figure Lengend Snippet: Performance characteristics of the diagnostic tests for SARS-CoV-2.

Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Techniques: Diagnostic Assay, Multiplex Assay, Real-time Polymerase Chain Reaction, Genotyping Assay, Sample Prep, Lateral Flow Assay, Enzyme-linked Immunosorbent Assay, Recombinant, Clinical Proteomics

Analytical assessment of antigen- and antibody-based diagnostic tests for SARS-CoV-2.

Journal: Tropical Medicine and Infectious Disease

Article Title: The Performance of Diagnostic Tests for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in the South African Population: A Scoping Review

doi: 10.3390/tropicalmed8120514

Figure Lengend Snippet: Analytical assessment of antigen- and antibody-based diagnostic tests for SARS-CoV-2.

Article Snippet: Umunnakwe et al., 2022 [ ] , Allplex TM SARS-CoV-2 Variants II multiplex real-time PCR genotyping assay, Seegene (Seoul, South Korea) , Illumina MiSeq (Illumina Inc., San Diego, CA, USA), PacBio Sequel IIe (Pacific Biosciences Inc., Menlo Park, CA, USA) or Genexus Ion Torrent (Thermo Scientific, Waltham, MA, USA) platforms. , 187 , Not reported , K417N (Beta), K417T (Gamma). L452R (Delta), W152C (Epsilon) , Not reported , No cross reactivity.

Techniques: Diagnostic Assay, Multiplex Assay, Real-time Polymerase Chain Reaction, Genotyping Assay, Sample Prep, Nucleic Acid Purification, Lateral Flow Assay, Variant Assay, Enzyme-linked Immunosorbent Assay, Recombinant, Clinical Proteomics